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HMMER
User's Guide |
A new directory hmmer-xx is created, where ``xx'' is the HMMER version number.
To build and test HMMER in its source directory, you don't need to edit the Makefile at all.
To permanently install HMMER on your system, set the make variables BINDIR and MANDIR to be the directories where you want HMMER executables and man pages to be installed. If you are installing in directories called bin/ and man/ in your home directory, you don't need to change anything.
The default Makefile is configured for cc (your vendor's compiler) and -O optimization. The package is known to build "out of the box" on SGI IRIX, Sun Solaris, GNU/Linux, or DEC Digital Unix platforms without any special modifications.
On SunOS 4.1.x systems, you will have to use the GNU gcc compiler, because SunOS cc is not ANSI-compliant.
You can play with the compiler options in CFLAGS to try to get more speed, if you're compiler-fluent.